Ragnar Larsson

doi:10.19080/OMCIJ.2020.09.555780

Mini Review

The Opera Diva, the Catalyst, and the Big Smash

Ragnar Larsson*

Department of Chemical Engineering, Lund University, Sweden

Submission: October 03, 2020;Published: October 27, 2020

*Corresponding author: Ragnar Larsson, Department of Chemical Engineering, Lund University, Lund, Sweden

How to cite this article: Ragnar L. The Opera Diva, the Catalyst, and the Big Smash. Organic & Medicinal Chem IJ. 2020; 10(1): 555780. DOI: 10.19080/OMCIJ.2020.09.555780.

Keywords:Magnetite; Molecular hydrogen; Nitrogen; Catalyst; Iron compounds; Metal atom; Carbonyl sulfide; Volcanic eruptions; Energy; Amino acid; Glycine; Hydrogen atom; Inorganic molecules; Electric discharges

Mini Review

Some of you might have heard or read about the tale of the opera singer who could really sing in tune and did so extremely well. Once she decided to try to approach the tone quality of the clink of a glass object on her table when that object was gently struck. It seemed that she succeeded, and her voice turned stronger and stronger and ----- smash! --- suddenly the glass object was split to pieces. The two vibration systems (the singer and the glass structure) were in harmony, as a musician would say, they were in resonance, a physicist would say.

It struck me, a few decades ago [1,2] when realizing that in many cases of catalytic reactions the activation energy was changing stepwise for a slight change of reaction conditions (such as different carriers), that this tale could be an illustration of how catalysis works: The catalyst corresponds to the opera diva, full of energy and wanting to share with others. The glass object corresponds to the molecule that reacts with bonds breaking, following energy transfer from the catalyst. Therefore, we have called this model of catalysis SET (Selective Energy Transfer). In the following we will indicate a few examples of such resonance effects.

A.One of the best known of technical catalysts is the one that was developed by Fritz Haber and coworkers. Just before 1914 Alwin Mittasch, after intensive experimentation, stated that an iron oxide compound (like magnetite, Fe₃O₄) was a very efficient catalyst for the reaction of nitrogen with molecular hydrogen. It is reasonable to assume that the critical vibration of the reactant is a M—N=N bending (Figure 1). Analysis of the activation energies of a series of iron compounds, favouring the reaction with H2, indicated that the critical vibration was 368±8cm^-1. Further, a strong bending vibration of magnetite is found to be at 364cm^-1 (Figure 2). Thus, one can conclude that energy is donated from the magnetite catalyst to the N₂ molecule, in contact with a metal atom. The adsorbing orbital is a M-N=N as indicated above [3,4]. This finding agrees with the SET model. For further details, vide the reference [5].

B.Let us now indicate the results of some recent work [6] on prebiotic reactions. In prebiotic times one frequently appearing catalyst was COS (carbonyl sulfide), streaming out of volcanic eruptions. This compound is characterized by a very strongly absorbing vibration at 2079cm^-1. Consequently, an activated COS molecule could easily emit energy at the same frequency, 2079cm^-1. Following SET, it could serve as a catalyst if the reacting, energy accepting molecule contained a vibration with about the same frequency. It could also be so that one quantum of this energy (2079cm^-1) acted in resonance with two quanta of the reactant of about 1040cm^-1. This is exemplified here by the “condensation” of two amino acids to form a peptide bond:

H₂N-CHR’-COOH + H₂N-CHR”-COOH =>H₂N-CHR”-CO-NH-CHR’-COOH. +H₂O

The question is now, how can this happen?

To answer this question, we must scrutinize the IR spectrum of an amino acid, e.g. glycine as metal complex. One finds that for, e.g., Ni(glycinate)2 there is a vibration at 1038cm^-1 [7]. This agrees with the requirement, stated above. But, even more, this vibration is a so-called wagging vibration of the NH₂ group, where the H atoms are moving perpendicularly against the NH₂ plane [7].

When this vibration is sufficiently excited - by getting energy from the catalyst-the sp3 orbital pattern is changed into a sp2 one. This means that one hydrogen atom is set free and can interact with the OH group of the other amino acid, forming water, H₂O. Consequently, an NH-C=O group is formed, binding the two molecules together. This is agreeing with the SET model. One can note that when Stanley Miller [8] in 1953 had shown that amino acids were formed when a mixture of simple inorganic molecules was bombarded by electric discharges (thunder storms), he and coworkers tried to achieve such a protein-creating condensation, but with no success. This shows the importance of using appropriate catalysts.